Decodon - Exploring Life Exploring Life.

Getting Started

The Getting Started Guide helps to get started to create visualisations with example data as quick as possible. Read it online, print it, or ask us for a copy - and enjoy working with Paver!

Each version of the Getting Started Guide is referring to a complete set of example data. Please find each data set below.

Paver Getting Started Guide

The Getting Started Guide is available in English.

Click on the symbol below to load the PDF file:

Getting Started

Example Data

Download the sample data described in the Getting Started Guide:

Treemap resulting from Example_Treemap.zip

This archive includes hierarchies with 4 sublevels below root, containing 6 clusters on the first sublevel.

The quantitative data has been generated synthetically, showing some changes between the two data sets.

As for now, the hierarchies are included in 5 different types, partially with hints (readme.txt) and variants: Simple Format, Path Format, Newick, FunCat and KEGG

Resulting View from Example_1_Streamgraph.zip

This archive includes basically the same hierarchy as before, but now as streamgraph and just containing the first 4 clusters on the first sublevel. This hierarchy is provided in two formats: the Simple Format and the Path Format.

Technically the hierarchy files are in the same format and structure, so that you can use the same files and formats as for the treemaps.

There are two sets of quantitative data contained, both generated synthetically as well. In the first set, clusters are positively correlated, in the second some clusters are correlated with the others with a certain time shift.

Resulting View from Example_2_Streamgraph.zip

Here we have the genome of the Bacillus Subtilis 168 and its Replicons, uncertainty data and oligo data.

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